Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHF3Q92576 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.68□□□□□ -0.06
PHF3Q92576 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHF3Q92576 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHF3Q92576 INGX-202ENST00000489074 768 ntBASIC14.68□□□□□ -0.06
PHF3Q92576 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.68□□□□□ -0.06
PHF3Q92576 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.68□□□□□ -0.06
PHF3Q92576 AC003101.2-201ENST00000612557 442 ntBASIC14.68□□□□□ -0.06
PHF3Q92576 AC018529.1-201ENST00000613063 361 ntBASIC14.68□□□□□ -0.06
PHF3Q92576 TEX28P1-201ENST00000613479 1221 ntBASIC14.68□□□□□ -0.06
PHF3Q92576 TEX28P2-201ENST00000617764 1221 ntBASIC14.68□□□□□ -0.06
PHF3Q92576 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.68□□□□□ -0.06
PHF3Q92576 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PHF3Q92576 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.68□□□□□ -0.06
PHF3Q92576 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PHF3Q92576 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PHF3Q92576 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 CYP2T1P-202ENST00000641596 2535 ntBASIC14.67□□□□□ -0.06
PHF3Q92576 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
PHF3Q92576 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.67□□□□□ -0.06
PHF3Q92576 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 MTND6P24-201ENST00000440466 518 ntBASIC14.67□□□□□ -0.06
PHF3Q92576 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PHF3Q92576 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.67□□□□□ -0.06
PHF3Q92576 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.67□□□□□ -0.06
PHF3Q92576 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.67□□□□□ -0.06
PHF3Q92576 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 RARRES2P9-201ENST00000565168 469 ntBASIC14.67□□□□□ -0.06
PHF3Q92576 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PHF3Q92576 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.67□□□□□ -0.06
PHF3Q92576 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PHF3Q92576 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PHF3Q92576 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
PHF3Q92576 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.66□□□□□ -0.06
PHF3Q92576 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 RNA5SP410-201ENST00000516285 106 ntBASIC14.66□□□□□ -0.06
PHF3Q92576 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.66□□□□□ -0.06
PHF3Q92576 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.66□□□□□ -0.06
PHF3Q92576 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
PHF3Q92576 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.66□□□□□ -0.06
PHF3Q92576 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.66□□□□□ -0.06
PHF3Q92576 SPDYE12P-201ENST00000618416 771 ntBASIC14.66□□□□□ -0.06
PHF3Q92576 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.66□□□□□ -0.06
PHF3Q92576 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.66□□□□□ -0.06
PHF3Q92576 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.66□□□□□ -0.06
PHF3Q92576 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.66□□□□□ -0.06
PHF3Q92576 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PHF3Q92576 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.66□□□□□ -0.06
PHF3Q92576 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.66□□□□□ -0.06
PHF3Q92576 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.66□□□□□ -0.06
PHF3Q92576 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.66□□□□□ -0.06
PHF3Q92576 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.66□□□□□ -0.06
PHF3Q92576 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHF3Q92576 AL353705.2-201ENST00000428243 662 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms