Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 AL009183.1-201ENST00000603760 355 ntBASIC16.57■□□□□ 0.24
PTCD2Q8WV60 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCD2Q8WV60 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 MIR648-201ENST00000385046 94 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 CNN2P11-201ENST00000429351 262 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 KRT8P48-201ENST00000515599 1220 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AC112191.1-201ENST00000523689 701 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 SNHG9-202ENST00000564014 471 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AC006213.5-201ENST00000619673 288 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AC027348.2-201ENST00000624375 642 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AC105339.1-204ENST00000636249 355 ntBASIC16.56■□□□□ 0.24
PTCD2Q8WV60 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTCD2Q8WV60 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AC004461.1-201ENST00000412461 403 ntBASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AL355306.1-201ENST00000415580 579 ntBASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AC254562.1-201ENST00000417586 456 ntBASIC16.55■□□□□ 0.24
PTCD2Q8WV60 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms