Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AC134915.1-201ENST00000426461 574 ntBASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AC022137.2-201ENST00000503482 481 ntBASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AC024267.1-201ENST00000582320 895 ntBASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AL359711.2-201ENST00000563105 872 ntBASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 FTLP10-202ENST00000505798 471 ntBASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC009486.1-201ENST00000569860 813 ntBASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 LINC01115-203ENST00000606068 577 ntBASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 EEF1DP1-201ENST00000585891 896 ntBASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC133963.1-201ENST00000504166 1679 ntBASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 AC004408.2-201ENST00000623613 2777 ntBASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCDC168Q8NDH2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CCDC168Q8NDH2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms