Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 HAUS4P1-201ENST00000406739 1145 ntBASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 AC140878.1-201ENST00000565277 250 ntBASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 RN7SL828P-201ENST00000607615 303 ntBASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 AC106028.4-201ENST00000614509 607 ntBASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAM1L1Q8N609 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAM1L1Q8N609 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms