Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 AC093724.1-201ENST00000448659 1027 ntBASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 AC092865.6-201ENST00000642101 219 ntBASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 MIR600HG-201ENST00000449175 5984 ntBASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 AC016027.1-202ENST00000607927 1699 ntBASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 KRT18P58-201ENST00000527480 1120 ntBASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 AC040169.1-201ENST00000565382 521 ntBASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TTC9CQ8N5M4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TTC9CQ8N5M4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms