Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC105Q8IYK2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC105Q8IYK2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC105Q8IYK2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC105Q8IYK2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC105Q8IYK2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 MEIS3P1-201ENST00000495167 958 ntBASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC105Q8IYK2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 AC132872.4-202ENST00000622924 2756 ntBASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 OR8S1-201ENST00000310194 1080 ntBASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 MIR943-201ENST00000401286 94 ntBASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 ACTG1P4-201ENST00000425123 1122 ntBASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 AL359881.2-201ENST00000602973 570 ntBASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 AC008761.3-201ENST00000624803 892 ntBASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC105Q8IYK2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 FAM185BP-201ENST00000443595 716 ntBASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 UGT1A2P-201ENST00000454886 866 ntBASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 LINC02560-201ENST00000596379 459 ntBASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 AC026120.1-201ENST00000611536 926 ntBASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC105Q8IYK2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms