Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 MTX1P1-201ENST00000440904 838 ntBASIC19.46■□□□□ 0.71
SLX4Q8IY92 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 AC009486.1-201ENST00000569860 813 ntBASIC19.46■□□□□ 0.71
SLX4Q8IY92 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 AC139713.2-201ENST00000641328 2723 ntBASIC19.46■□□□□ 0.71
SLX4Q8IY92 DRD5P1-201ENST00000456605 1438 ntBASIC19.46■□□□□ 0.71
SLX4Q8IY92 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 SLC25A24P2-201ENST00000415059 510 ntBASIC19.46■□□□□ 0.71
SLX4Q8IY92 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 AC078819.1-201ENST00000547454 765 ntBASIC19.46■□□□□ 0.71
SLX4Q8IY92 AC012085.1-201ENST00000548270 765 ntBASIC19.46■□□□□ 0.71
SLX4Q8IY92 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SLX4Q8IY92 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLX4Q8IY92 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 AC105129.2-201ENST00000559536 390 ntBASIC19.45■□□□□ 0.7
SLX4Q8IY92 AC106872.11-201ENST00000605838 421 ntBASIC19.45■□□□□ 0.7
SLX4Q8IY92 AL022328.3-201ENST00000607943 679 ntBASIC19.45■□□□□ 0.7
SLX4Q8IY92 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLX4Q8IY92 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLX4Q8IY92 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 AL607033.1-201ENST00000623900 1599 ntBASIC19.44■□□□□ 0.7
SLX4Q8IY92 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 AL590640.2-201ENST00000457038 527 ntBASIC19.44■□□□□ 0.7
SLX4Q8IY92 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 PHKG1P2-201ENST00000457537 863 ntBASIC19.44■□□□□ 0.7
SLX4Q8IY92 KRT18P43-201ENST00000469825 1281 ntBASIC19.44■□□□□ 0.7
SLX4Q8IY92 AC026410.3-201ENST00000514280 936 ntBASIC19.44■□□□□ 0.7
SLX4Q8IY92 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLX4Q8IY92 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.44■□□□□ 0.7
SLX4Q8IY92 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms