Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCUBE3Q8IX30 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SCUBE3Q8IX30 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 AL139400.1-201ENST00000366220 510 ntBASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 FAM220BP-201ENST00000377689 816 ntBASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 RNA5SP410-201ENST00000516285 106 ntBASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.12■□□□□ 0.33
SCUBE3Q8IX30 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 HLA-H-201ENST00000383620 1096 ntBASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 AL645939.2-201ENST00000427340 991 ntBASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 HLA-J-203ENST00000494367 1087 ntBASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 AC026150.2-201ENST00000564693 1156 ntBASIC17.11■□□□□ 0.33
SCUBE3Q8IX30 RARRES2P9-201ENST00000565168 469 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms