Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 AC004898.1-201ENST00000451057 766 ntBASIC20.13■□□□□ 0.81
COL23A1Q86Y22 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 AC078819.1-201ENST00000547454 765 ntBASIC20.13■□□□□ 0.81
COL23A1Q86Y22 AC012085.1-201ENST00000548270 765 ntBASIC20.13■□□□□ 0.81
COL23A1Q86Y22 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL23A1Q86Y22 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 FAM197Y7-201ENST00000432892 766 ntBASIC20.12■□□□□ 0.81
COL23A1Q86Y22 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 AC091804.1-201ENST00000486888 567 ntBASIC20.12■□□□□ 0.81
COL23A1Q86Y22 AP002490.2-201ENST00000524791 560 ntBASIC20.12■□□□□ 0.81
COL23A1Q86Y22 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 CHMP4BP1-201ENST00000556017 588 ntBASIC20.12■□□□□ 0.81
COL23A1Q86Y22 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL23A1Q86Y22 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AC091046.1-201ENST00000331871 207 ntBASIC20.11■□□□□ 0.81
COL23A1Q86Y22 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 ACKR1-201ENST00000368121 1240 ntBASIC20.11■□□□□ 0.81
COL23A1Q86Y22 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 AC134043.2-201ENST00000624206 2238 ntBASIC20.11■□□□□ 0.81
COL23A1Q86Y22 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.11■□□□□ 0.81
COL23A1Q86Y22 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL23A1Q86Y22 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms