Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 AC009336.1-201ENST00000608941 1553 ntBASIC13.62□□□□□ -0.23
ZNF546Q86UE3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF546Q86UE3 AC005840.4-201ENST00000541242 2494 ntBASIC13.62□□□□□ -0.23
ZNF546Q86UE3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 MMP23A-201ENST00000234610 1017 ntBASIC13.61□□□□□ -0.23
ZNF546Q86UE3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 AC103564.2-201ENST00000432853 1299 ntBASIC13.61□□□□□ -0.23
ZNF546Q86UE3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 STK19B-204ENST00000512515 211 ntBASIC13.61□□□□□ -0.23
ZNF546Q86UE3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 KRT8P10-201ENST00000450021 1447 ntBASIC13.61□□□□□ -0.23
ZNF546Q86UE3 KRT8P49-201ENST00000604166 1432 ntBASIC13.61□□□□□ -0.23
ZNF546Q86UE3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 AC087386.2-201ENST00000623212 4637 ntBASIC13.61□□□□□ -0.23
ZNF546Q86UE3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
ZNF546Q86UE3 AC092919.2-201ENST00000623631 1645 ntBASIC13.61□□□□□ -0.23
ZNF546Q86UE3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 IGHGP-201ENST00000390555 1178 ntBASIC13.6□□□□□ -0.23
ZNF546Q86UE3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 AC007967.3-201ENST00000434308 558 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms