Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT28Q7Z3Y7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 AC060834.1-201ENST00000443027 2032 ntBASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 BNIP3P1-202ENST00000550043 1585 ntBASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT28Q7Z3Y7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 CNN2P8-201ENST00000421872 913 ntBASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
KRT28Q7Z3Y7 AC009053.2-201ENST00000563701 2365 ntBASIC21.7■■□□□ 1.07
KRT28Q7Z3Y7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 AP001258.2-201ENST00000529891 490 ntBASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 AL022328.3-201ENST00000607943 679 ntBASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 NEFHP1-201ENST00000412845 2629 ntBASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 AL607033.1-201ENST00000623900 1599 ntBASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT28Q7Z3Y7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 REXO1L8P-201ENST00000604378 1897 ntBASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 SLC25A24P2-201ENST00000415059 510 ntBASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 CALR4P-201ENST00000431943 946 ntBASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.69■■□□□ 1.06
KRT28Q7Z3Y7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms