Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 AL645728.1-201ENST00000366221 2101 ntBASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.12■□□□□ 0.81
RGPD4Q7Z3J3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 KRT18P66-201ENST00000452970 1269 ntBASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AC073413.1-201ENST00000603927 732 ntBASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AC004408.2-201ENST00000623613 2777 ntBASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 TUBBP5-203ENST00000508529 1334 ntBASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 RN7SL48P-201ENST00000579283 293 ntBASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AL353726.2-201ENST00000623259 884 ntBASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 AC011491.1-203ENST00000637688 543 ntBASIC20.11■□□□□ 0.81
RGPD4Q7Z3J3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 AC116345.2-201ENST00000512837 523 ntBASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 CTBP2P4-201ENST00000513884 920 ntBASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 AC100757.4-201ENST00000626934 759 ntBASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RGPD4Q7Z3J3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 AL161670.2-201ENST00000557650 1227 ntBASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 RN7SL774P-201ENST00000577467 290 ntBASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RGPD4Q7Z3J3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD4Q7Z3J3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms