Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 PTCHD3P3-201ENST00000403073 906 ntBASIC14.8□□□□□ -0.04
SHFQ7M4L6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 UPK3BP1-201ENST00000428678 509 ntBASIC14.8□□□□□ -0.04
SHFQ7M4L6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 SART3-203ENST00000546611 1184 ntBASIC14.8□□□□□ -0.04
SHFQ7M4L6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 CYP2A7P1-201ENST00000595391 815 ntBASIC14.8□□□□□ -0.04
SHFQ7M4L6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 AL805961.1-202ENST00000641562 540 ntBASIC14.8□□□□□ -0.04
SHFQ7M4L6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 HCG4P8-203ENST00000443049 980 ntBASIC14.79□□□□□ -0.04
SHFQ7M4L6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.79□□□□□ -0.04
SHFQ7M4L6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 AP001350.2-201ENST00000625104 1094 ntBASIC14.79□□□□□ -0.04
SHFQ7M4L6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
SHFQ7M4L6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHFQ7M4L6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms