Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TUBA1AQ71U36 AP002414.3-201ENST00000589352 1468 ntBASIC15.14■□□□□ 0.01
TUBA1AQ71U36 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 LAGE3P1-201ENST00000425356 484 ntBASIC15.13■□□□□ 0.01
TUBA1AQ71U36 NCF1C-201ENST00000438382 1427 ntBASIC15.13■□□□□ 0.01
TUBA1AQ71U36 AC092910.1-201ENST00000482027 1129 ntBASIC15.13■□□□□ 0.01
TUBA1AQ71U36 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TUBA1AQ71U36 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 AC243591.1-201ENST00000452967 1364 ntBASIC15.12■□□□□ 0.01
TUBA1AQ71U36 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 ELK2BP-201ENST00000415014 1224 ntBASIC15.12■□□□□ 0.01
TUBA1AQ71U36 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TUBA1AQ71U36 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC002310.6-201ENST00000624451 1377 ntBASIC15.11■□□□□ 0.01
TUBA1AQ71U36 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC006504.4-201ENST00000592118 1568 ntBASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms