Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP4Q6PIL6 AC232323.1-201ENST00000540724 2099 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 REXO1L5P-201ENST00000622260 2098 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AL021920.2-201ENST00000624828 1351 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CICP23-201ENST00000605013 2741 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AL391807.1-203ENST00000604392 2365 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 MMP23A-201ENST00000234610 1017 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 EGLN1P1-201ENST00000531623 762 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AC009154.2-201ENST00000621177 724 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AL139011.1-202ENST00000642063 584 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AL137784.3-201ENST00000623858 2288 ntBASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP4Q6PIL6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP4Q6PIL6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms