Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LPCAT4Q643R3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 AC243591.1-201ENST00000452967 1364 ntBASIC15.42■□□□□ 0.06
LPCAT4Q643R3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 AC026396.1-201ENST00000419388 421 ntBASIC15.42■□□□□ 0.06
LPCAT4Q643R3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 PGM5P2-202ENST00000637225 1043 ntBASIC15.42■□□□□ 0.06
LPCAT4Q643R3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.42■□□□□ 0.06
LPCAT4Q643R3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 HBZP1-201ENST00000354915 429 ntBASIC15.41■□□□□ 0.06
LPCAT4Q643R3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 AC148477.5-201ENST00000625164 1645 ntBASIC15.41■□□□□ 0.06
LPCAT4Q643R3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 AC090616.6-203ENST00000579186 1945 ntBASIC15.41■□□□□ 0.06
LPCAT4Q643R3 KRT17P2-201ENST00000300992 1314 ntBASIC15.41■□□□□ 0.06
LPCAT4Q643R3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LPCAT4Q643R3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 AC112693.3-201ENST00000624819 1983 ntBASIC15.4■□□□□ 0.06
LPCAT4Q643R3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms