Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 U82695.1-201ENST00000635752 1889 ntBASIC15.75■□□□□ 0.11
HMGCS1Q01581 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 AC092919.2-201ENST00000623631 1645 ntBASIC15.75■□□□□ 0.11
HMGCS1Q01581 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.75■□□□□ 0.11
HMGCS1Q01581 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCS1Q01581 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCS1Q01581 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 AP005117.1-202ENST00000581724 1908 ntBASIC15.74■□□□□ 0.11
HMGCS1Q01581 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 AC018845.2-201ENST00000568326 409 ntBASIC15.74■□□□□ 0.11
HMGCS1Q01581 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 AL009183.1-201ENST00000603760 355 ntBASIC15.74■□□□□ 0.11
HMGCS1Q01581 AC023141.13-201ENST00000604991 943 ntBASIC15.74■□□□□ 0.11
HMGCS1Q01581 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.74■□□□□ 0.11
HMGCS1Q01581 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 AC104109.2-201ENST00000602919 1418 ntBASIC15.74■□□□□ 0.11
HMGCS1Q01581 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCS1Q01581 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCS1Q01581 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 MIR648-201ENST00000385046 94 ntBASIC15.73■□□□□ 0.11
HMGCS1Q01581 AL590627.1-203ENST00000421194 1026 ntBASIC15.73■□□□□ 0.11
HMGCS1Q01581 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 BX640515.1-201ENST00000617215 977 ntBASIC15.73■□□□□ 0.11
HMGCS1Q01581 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCS1Q01581 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCS1Q01581 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 IL9RP2-201ENST00000423948 1312 ntBASIC15.72■□□□□ 0.11
HMGCS1Q01581 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCS1Q01581 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms