Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.97■□□□□ 0.63
IRX3P78415 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.97■□□□□ 0.63
IRX3P78415 SERBP1P3-201ENST00000459980 809 ntBASIC18.97■□□□□ 0.63
IRX3P78415 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 AL512361.1-201ENST00000554200 418 ntBASIC18.97■□□□□ 0.63
IRX3P78415 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.97■□□□□ 0.63
IRX3P78415 AC024267.1-201ENST00000582320 895 ntBASIC18.97■□□□□ 0.63
IRX3P78415 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
IRX3P78415 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
IRX3P78415 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.97■□□□□ 0.63
IRX3P78415 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
IRX3P78415 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.97■□□□□ 0.63
IRX3P78415 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IRX3P78415 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
IRX3P78415 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX3P78415 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 DGCR5-201ENST00000399539 862 ntBASIC18.96■□□□□ 0.63
IRX3P78415 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.96■□□□□ 0.63
IRX3P78415 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 DOC2GP-202ENST00000514950 1163 ntBASIC18.96■□□□□ 0.63
IRX3P78415 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
IRX3P78415 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.96■□□□□ 0.63
IRX3P78415 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 AC010336.2-201ENST00000564226 506 ntBASIC18.96■□□□□ 0.63
IRX3P78415 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.96■□□□□ 0.63
IRX3P78415 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.96■□□□□ 0.63
IRX3P78415 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX3P78415 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
IRX3P78415 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX3P78415 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.96■□□□□ 0.63
IRX3P78415 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
IRX3P78415 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
IRX3P78415 PCDHB17P-201ENST00000539533 2393 ntBASIC18.96■□□□□ 0.63
IRX3P78415 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IRX3P78415 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
IRX3P78415 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
IRX3P78415 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.95■□□□□ 0.62
IRX3P78415 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.95■□□□□ 0.62
IRX3P78415 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IRX3P78415 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
IRX3P78415 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
IRX3P78415 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.95■□□□□ 0.62
IRX3P78415 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IRX3P78415 RN7SL752P-201ENST00000463779 287 ntBASIC18.95■□□□□ 0.62
IRX3P78415 GIMAP3P-201ENST00000495150 836 ntBASIC18.95■□□□□ 0.62
IRX3P78415 AC093004.1-201ENST00000508850 424 ntBASIC18.95■□□□□ 0.62
IRX3P78415 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
IRX3P78415 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.95■□□□□ 0.62
IRX3P78415 IGHV3-71-201ENST00000523324 359 ntBASIC18.95■□□□□ 0.62
IRX3P78415 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.95■□□□□ 0.62
IRX3P78415 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.95■□□□□ 0.62
IRX3P78415 AC026979.3-201ENST00000607315 403 ntBASIC18.95■□□□□ 0.62
IRX3P78415 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
IRX3P78415 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
IRX3P78415 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IRX3P78415 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX3P78415 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.94■□□□□ 0.62
IRX3P78415 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms