Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.35■□□□□ 0.53
TPM4P67936 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM4P67936 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.35■□□□□ 0.53
TPM4P67936 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM4P67936 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM4P67936 AC116407.4-201ENST00000623319 1061 ntBASIC18.35■□□□□ 0.53
TPM4P67936 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.35■□□□□ 0.53
TPM4P67936 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM4P67936 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM4P67936 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 AC006058.4-201ENST00000624016 1670 ntBASIC18.34■□□□□ 0.53
TPM4P67936 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM4P67936 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM4P67936 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 TMPOP1-202ENST00000424642 1267 ntBASIC18.34■□□□□ 0.53
TPM4P67936 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM4P67936 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM4P67936 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM4P67936 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 AC139887.3-201ENST00000568585 713 ntBASIC18.34■□□□□ 0.53
TPM4P67936 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM4P67936 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM4P67936 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TPM4P67936 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM4P67936 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
TPM4P67936 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM4P67936 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM4P67936 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM4P67936 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM4P67936 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM4P67936 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM4P67936 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM4P67936 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TPM4P67936 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TPM4P67936 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM4P67936 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TPM4P67936 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM4P67936 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.33■□□□□ 0.52
TPM4P67936 PMS2P1-201ENST00000431037 1228 ntBASIC18.33■□□□□ 0.52
TPM4P67936 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.33■□□□□ 0.52
TPM4P67936 AP001269.4-201ENST00000609611 512 ntBASIC18.33■□□□□ 0.52
TPM4P67936 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM4P67936 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM4P67936 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM4P67936 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TPM4P67936 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TPM4P67936 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM4P67936 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TPM4P67936 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM4P67936 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM4P67936 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TPM4P67936 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms