Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.14■□□□□ 0.33
USP46P62068 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
USP46P62068 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
USP46P62068 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 MIR661-201ENST00000384842 89 ntBASIC17.14■□□□□ 0.33
USP46P62068 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.14■□□□□ 0.33
USP46P62068 AL353705.2-201ENST00000428243 662 ntBASIC17.14■□□□□ 0.33
USP46P62068 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 AC027369.6-201ENST00000525520 931 ntBASIC17.14■□□□□ 0.33
USP46P62068 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.14■□□□□ 0.33
USP46P62068 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 AC105021.1-202ENST00000570572 669 ntBASIC17.14■□□□□ 0.33
USP46P62068 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.14■□□□□ 0.33
USP46P62068 AC061975.2-201ENST00000581722 295 ntBASIC17.14■□□□□ 0.33
USP46P62068 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 AJ011932.1-201ENST00000621707 465 ntBASIC17.14■□□□□ 0.33
USP46P62068 AC073592.8-201ENST00000624126 511 ntBASIC17.14■□□□□ 0.33
USP46P62068 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.14■□□□□ 0.33
USP46P62068 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.14■□□□□ 0.33
USP46P62068 AC008741.2-201ENST00000612792 3115 ntBASIC17.14■□□□□ 0.33
USP46P62068 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
USP46P62068 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP46P62068 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.13■□□□□ 0.33
USP46P62068 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
USP46P62068 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 LINC01144-201ENST00000626198 1710 ntBASIC17.13■□□□□ 0.33
USP46P62068 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 PCDHB19P-201ENST00000570871 2371 ntBASIC17.13■□□□□ 0.33
USP46P62068 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.13■□□□□ 0.33
USP46P62068 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.13■□□□□ 0.33
USP46P62068 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.13■□□□□ 0.33
USP46P62068 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.13■□□□□ 0.33
USP46P62068 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.13■□□□□ 0.33
USP46P62068 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.13■□□□□ 0.33
USP46P62068 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.13■□□□□ 0.33
USP46P62068 RN7SL828P-201ENST00000607615 303 ntBASIC17.13■□□□□ 0.33
USP46P62068 PCDHA1-201ENST00000378133 2726 ntBASIC17.13■□□□□ 0.33
USP46P62068 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
USP46P62068 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 ALOX12P2-203ENST00000570921 1945 ntBASIC17.13■□□□□ 0.33
USP46P62068 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
USP46P62068 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP46P62068 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.13■□□□□ 0.33
USP46P62068 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.13■□□□□ 0.33
USP46P62068 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
USP46P62068 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP46P62068 AC100757.3-201ENST00000622361 1406 ntBASIC17.13■□□□□ 0.33
USP46P62068 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.13■□□□□ 0.33
USP46P62068 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms