Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.31■□□□□ 0.36
MCCD1P59942 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.31■□□□□ 0.36
MCCD1P59942 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.31■□□□□ 0.36
MCCD1P59942 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.31■□□□□ 0.36
MCCD1P59942 AL079307.3-201ENST00000556114 283 ntBASIC17.31■□□□□ 0.36
MCCD1P59942 SNHG9-202ENST00000564014 471 ntBASIC17.31■□□□□ 0.36
MCCD1P59942 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
MCCD1P59942 AL450472.2-201ENST00000603663 1156 ntBASIC17.31■□□□□ 0.36
MCCD1P59942 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 AC079781.4-201ENST00000641908 219 ntBASIC17.31■□□□□ 0.36
MCCD1P59942 AC105917.1-201ENST00000506637 2539 ntBASIC17.31■□□□□ 0.36
MCCD1P59942 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
MCCD1P59942 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.31■□□□□ 0.36
MCCD1P59942 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MCCD1P59942 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.31■□□□□ 0.36
MCCD1P59942 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.31■□□□□ 0.36
MCCD1P59942 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
MCCD1P59942 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MCCD1P59942 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.31■□□□□ 0.36
MCCD1P59942 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MCCD1P59942 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
MCCD1P59942 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
MCCD1P59942 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.3■□□□□ 0.36
MCCD1P59942 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.3■□□□□ 0.36
MCCD1P59942 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MCCD1P59942 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.3■□□□□ 0.36
MCCD1P59942 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.3■□□□□ 0.36
MCCD1P59942 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.3■□□□□ 0.36
MCCD1P59942 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.3■□□□□ 0.36
MCCD1P59942 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.3■□□□□ 0.36
MCCD1P59942 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.3■□□□□ 0.36
MCCD1P59942 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.3■□□□□ 0.36
MCCD1P59942 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
MCCD1P59942 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.3■□□□□ 0.36
MCCD1P59942 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.3■□□□□ 0.36
MCCD1P59942 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MCCD1P59942 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MCCD1P59942 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 HTR7P1-202ENST00000624664 4411 ntBASIC17.29■□□□□ 0.36
MCCD1P59942 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MCCD1P59942 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MCCD1P59942 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
MCCD1P59942 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MCCD1P59942 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 AL080243.2-201ENST00000418783 582 ntBASIC17.29■□□□□ 0.36
MCCD1P59942 TSEN15P1-201ENST00000423257 515 ntBASIC17.29■□□□□ 0.36
MCCD1P59942 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.29■□□□□ 0.36
MCCD1P59942 HLA-V-204ENST00000476601 1289 ntBASIC17.29■□□□□ 0.36
MCCD1P59942 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.29■□□□□ 0.36
MCCD1P59942 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.29■□□□□ 0.36
MCCD1P59942 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.29■□□□□ 0.36
MCCD1P59942 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.29■□□□□ 0.36
MCCD1P59942 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.29■□□□□ 0.36
MCCD1P59942 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.29■□□□□ 0.36
MCCD1P59942 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.29■□□□□ 0.36
MCCD1P59942 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.29■□□□□ 0.36
MCCD1P59942 AL596442.2-201ENST00000610240 980 ntBASIC17.29■□□□□ 0.36
MCCD1P59942 AL691403.2-201ENST00000618460 490 ntBASIC17.29■□□□□ 0.36
MCCD1P59942 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.29■□□□□ 0.36
MCCD1P59942 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MCCD1P59942 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.29■□□□□ 0.36
MCCD1P59942 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.28■□□□□ 0.36
MCCD1P59942 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MCCD1P59942 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms