Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC027369.6-201ENST00000525520 931 ntBASIC21.26■□□□□ 0.99
RIPK4P57078 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.26■□□□□ 0.99
RIPK4P57078 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.26■□□□□ 0.99
RIPK4P57078 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RIPK4P57078 AC073592.8-201ENST00000624126 511 ntBASIC21.26■□□□□ 0.99
RIPK4P57078 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK4P57078 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK4P57078 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.26■□□□□ 0.99
RIPK4P57078 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RIPK4P57078 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RIPK4P57078 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
RIPK4P57078 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
RIPK4P57078 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK4P57078 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RIPK4P57078 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK4P57078 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK4P57078 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK4P57078 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RIPK4P57078 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RIPK4P57078 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.25■□□□□ 0.99
RIPK4P57078 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 RPL37AP1-201ENST00000412502 279 ntBASIC21.25■□□□□ 0.99
RIPK4P57078 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.25■□□□□ 0.99
RIPK4P57078 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.25■□□□□ 0.99
RIPK4P57078 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.25■□□□□ 0.99
RIPK4P57078 IGHV3-42-201ENST00000520410 361 ntBASIC21.25■□□□□ 0.99
RIPK4P57078 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.25■□□□□ 0.99
RIPK4P57078 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.25■□□□□ 0.99
RIPK4P57078 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.25■□□□□ 0.99
RIPK4P57078 AL589739.1-201ENST00000607720 493 ntBASIC21.25■□□□□ 0.99
RIPK4P57078 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RIPK4P57078 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.25■□□□□ 0.99
RIPK4P57078 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RIPK4P57078 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.25■□□□□ 0.99
RIPK4P57078 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RIPK4P57078 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.25■□□□□ 0.99
RIPK4P57078 AL596087.1-201ENST00000400979 1969 ntBASIC21.25■□□□□ 0.99
RIPK4P57078 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
RIPK4P57078 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RIPK4P57078 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.24■□□□□ 0.99
RIPK4P57078 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.24■□□□□ 0.99
RIPK4P57078 AL139010.1-201ENST00000454878 894 ntBASIC21.24■□□□□ 0.99
RIPK4P57078 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 AC093214.1-201ENST00000511688 1107 ntBASIC21.24■□□□□ 0.99
RIPK4P57078 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.24■□□□□ 0.99
RIPK4P57078 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 AL079307.3-201ENST00000556114 283 ntBASIC21.24■□□□□ 0.99
RIPK4P57078 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 AL390754.1-201ENST00000619088 582 ntBASIC21.24■□□□□ 0.99
RIPK4P57078 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.24■□□□□ 0.99
RIPK4P57078 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
RIPK4P57078 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RIPK4P57078 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
RIPK4P57078 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.24■□□□□ 0.99
RIPK4P57078 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK4P57078 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RIPK4P57078 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK4P57078 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK4P57078 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK4P57078 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.23■□□□□ 0.99
RIPK4P57078 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RIPK4P57078 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.23■□□□□ 0.99
RIPK4P57078 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.23■□□□□ 0.99
RIPK4P57078 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms