Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GFRA1P56159 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GFRA1P56159 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
GFRA1P56159 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.55□□□□□ -0.08
GFRA1P56159 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 AC006449.6-201ENST00000612330 2296 ntBASIC14.54□□□□□ -0.08
GFRA1P56159 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GFRA1P56159 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.54□□□□□ -0.08
GFRA1P56159 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.54□□□□□ -0.08
GFRA1P56159 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.54□□□□□ -0.08
GFRA1P56159 AC009477.1-201ENST00000452936 217 ntBASIC14.54□□□□□ -0.08
GFRA1P56159 UGT1A2P-201ENST00000454886 866 ntBASIC14.54□□□□□ -0.08
GFRA1P56159 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.54□□□□□ -0.08
GFRA1P56159 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.54□□□□□ -0.08
GFRA1P56159 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 MIR3197-201ENST00000582241 73 ntBASIC14.54□□□□□ -0.08
GFRA1P56159 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.54□□□□□ -0.08
GFRA1P56159 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 AL844908.2-201ENST00000609461 460 ntBASIC14.54□□□□□ -0.08
GFRA1P56159 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.54□□□□□ -0.08
GFRA1P56159 CYP4F24P-201ENST00000586049 1580 ntBASIC14.54□□□□□ -0.08
GFRA1P56159 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.54□□□□□ -0.08
GFRA1P56159 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GFRA1P56159 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GFRA1P56159 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
GFRA1P56159 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.53□□□□□ -0.08
GFRA1P56159 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.53□□□□□ -0.08
GFRA1P56159 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.53□□□□□ -0.08
GFRA1P56159 AL691432.1-201ENST00000596308 1422 ntBASIC14.53□□□□□ -0.08
GFRA1P56159 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.53□□□□□ -0.08
GFRA1P56159 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 MRPS18AP1-201ENST00000414458 589 ntBASIC14.53□□□□□ -0.08
GFRA1P56159 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.53□□□□□ -0.08
GFRA1P56159 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.53□□□□□ -0.08
GFRA1P56159 MIR4745-201ENST00000577608 62 ntBASIC14.53□□□□□ -0.08
GFRA1P56159 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GFRA1P56159 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.53□□□□□ -0.08
GFRA1P56159 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GFRA1P56159 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFRA1P56159 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFRA1P56159 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.52□□□□□ -0.08
GFRA1P56159 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
GFRA1P56159 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFRA1P56159 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFRA1P56159 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GFRA1P56159 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.52□□□□□ -0.08
GFRA1P56159 TNRC18P3-201ENST00000441896 2691 ntBASIC14.52□□□□□ -0.08
GFRA1P56159 AC022144.1-201ENST00000602255 1580 ntBASIC14.52□□□□□ -0.08
GFRA1P56159 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GFRA1P56159 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.52□□□□□ -0.08
GFRA1P56159 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms