Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
APOC4P55056 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.93□□□□□ -0.5
APOC4P55056 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC4P55056 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.93□□□□□ -0.5
APOC4P55056 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC4P55056 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC4P55056 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC4P55056 MIR4745-201ENST00000577608 62 ntBASIC11.93□□□□□ -0.5
APOC4P55056 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 RN7SL828P-201ENST00000607615 303 ntBASIC11.93□□□□□ -0.5
APOC4P55056 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.93□□□□□ -0.5
APOC4P55056 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.93□□□□□ -0.5
APOC4P55056 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
APOC4P55056 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
APOC4P55056 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
APOC4P55056 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
APOC4P55056 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC4P55056 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC4P55056 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 AL139010.1-201ENST00000454878 894 ntBASIC11.92□□□□□ -0.5
APOC4P55056 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC4P55056 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.92□□□□□ -0.5
APOC4P55056 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.92□□□□□ -0.5
APOC4P55056 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.92□□□□□ -0.5
APOC4P55056 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 SPDYE12P-201ENST00000618416 771 ntBASIC11.92□□□□□ -0.5
APOC4P55056 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.92□□□□□ -0.5
APOC4P55056 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC4P55056 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
APOC4P55056 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.92□□□□□ -0.5
APOC4P55056 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.92□□□□□ -0.5
APOC4P55056 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOC4P55056 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.91□□□□□ -0.5
APOC4P55056 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
APOC4P55056 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms