Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.32■□□□□ 0.52
EPHB4P54760 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.32■□□□□ 0.52
EPHB4P54760 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.32■□□□□ 0.52
EPHB4P54760 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.32■□□□□ 0.52
EPHB4P54760 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.32■□□□□ 0.52
EPHB4P54760 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHB4P54760 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.32■□□□□ 0.52
EPHB4P54760 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
EPHB4P54760 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
EPHB4P54760 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.32■□□□□ 0.52
EPHB4P54760 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EPHB4P54760 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.31■□□□□ 0.52
EPHB4P54760 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.31■□□□□ 0.52
EPHB4P54760 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
EPHB4P54760 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
EPHB4P54760 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHB4P54760 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.31■□□□□ 0.52
EPHB4P54760 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 AL512384.1-201ENST00000406683 331 ntBASIC18.31■□□□□ 0.52
EPHB4P54760 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHB4P54760 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.31■□□□□ 0.52
EPHB4P54760 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.31■□□□□ 0.52
EPHB4P54760 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.31■□□□□ 0.52
EPHB4P54760 TEX28P1-201ENST00000613479 1221 ntBASIC18.31■□□□□ 0.52
EPHB4P54760 TEX28P2-201ENST00000617764 1221 ntBASIC18.31■□□□□ 0.52
EPHB4P54760 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.31■□□□□ 0.52
EPHB4P54760 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 PCDHB17P-201ENST00000539533 2393 ntBASIC18.31■□□□□ 0.52
EPHB4P54760 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
EPHB4P54760 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.31■□□□□ 0.52
EPHB4P54760 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
EPHB4P54760 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EPHB4P54760 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EPHB4P54760 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHB4P54760 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
EPHB4P54760 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EPHB4P54760 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.3■□□□□ 0.52
EPHB4P54760 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
EPHB4P54760 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.3■□□□□ 0.52
EPHB4P54760 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
EPHB4P54760 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.3■□□□□ 0.52
EPHB4P54760 MIR6805-201ENST00000615055 62 ntBASIC18.3■□□□□ 0.52
EPHB4P54760 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EPHB4P54760 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EPHB4P54760 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
EPHB4P54760 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHB4P54760 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EPHB4P54760 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.3■□□□□ 0.52
EPHB4P54760 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EPHB4P54760 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EPHB4P54760 AC087499.5-201ENST00000452760 1342 ntBASIC18.29■□□□□ 0.52
EPHB4P54760 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms