Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
USP11P51784 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP11P51784 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.35■□□□□ 0.53
USP11P51784 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP11P51784 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.35■□□□□ 0.53
USP11P51784 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USP11P51784 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 SPDYE17-201ENST00000412399 783 ntBASIC18.35■□□□□ 0.53
USP11P51784 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.35■□□□□ 0.53
USP11P51784 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.35■□□□□ 0.53
USP11P51784 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 DUX4L27-201ENST00000554796 1261 ntBASIC18.35■□□□□ 0.53
USP11P51784 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.35■□□□□ 0.53
USP11P51784 AL158211.3-201ENST00000607385 239 ntBASIC18.35■□□□□ 0.53
USP11P51784 AC106028.4-201ENST00000614509 607 ntBASIC18.35■□□□□ 0.53
USP11P51784 AC093512.1-201ENST00000617969 520 ntBASIC18.35■□□□□ 0.53
USP11P51784 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.35■□□□□ 0.53
USP11P51784 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
USP11P51784 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP11P51784 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP11P51784 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP11P51784 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
USP11P51784 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
USP11P51784 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.34■□□□□ 0.53
USP11P51784 AC004987.2-201ENST00000395959 1148 ntBASIC18.34■□□□□ 0.53
USP11P51784 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.34■□□□□ 0.53
USP11P51784 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.34■□□□□ 0.53
USP11P51784 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 HLA-V-204ENST00000476601 1289 ntBASIC18.34■□□□□ 0.53
USP11P51784 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP11P51784 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 AL136982.4-201ENST00000437689 1740 ntBASIC18.34■□□□□ 0.53
USP11P51784 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP11P51784 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP11P51784 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP11P51784 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.33■□□□□ 0.53
USP11P51784 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP11P51784 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USP11P51784 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.33■□□□□ 0.53
USP11P51784 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP11P51784 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.33■□□□□ 0.53
USP11P51784 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP11P51784 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.33■□□□□ 0.53
USP11P51784 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.33■□□□□ 0.53
USP11P51784 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.33■□□□□ 0.53
USP11P51784 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP11P51784 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP11P51784 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.33■□□□□ 0.52
USP11P51784 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 AC097493.3-201ENST00000509725 367 ntBASIC18.33■□□□□ 0.52
USP11P51784 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 AC243562.2-201ENST00000561247 970 ntBASIC18.33■□□□□ 0.52
USP11P51784 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.33■□□□□ 0.52
USP11P51784 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms