Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.91□□□□□ -0.02
SSR4P51571 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SSR4P51571 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR4P51571 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.91□□□□□ -0.02
SSR4P51571 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR4P51571 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 TEX28P1-201ENST00000613479 1221 ntBASIC14.91□□□□□ -0.02
SSR4P51571 TEX28P2-201ENST00000617764 1221 ntBASIC14.91□□□□□ -0.02
SSR4P51571 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.91□□□□□ -0.02
SSR4P51571 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.91□□□□□ -0.02
SSR4P51571 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR4P51571 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.91□□□□□ -0.02
SSR4P51571 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SSR4P51571 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.91□□□□□ -0.02
SSR4P51571 LTB4R2-202ENST00000528054 3092 ntBASIC14.91□□□□□ -0.02
SSR4P51571 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SSR4P51571 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.91□□□□□ -0.02
SSR4P51571 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR4P51571 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SSR4P51571 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 AC005052.1-201ENST00000625181 2492 ntBASIC14.9□□□□□ -0.02
SSR4P51571 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 RPL37AP1-201ENST00000412502 279 ntBASIC14.9□□□□□ -0.02
SSR4P51571 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR4P51571 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.9□□□□□ -0.02
SSR4P51571 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR4P51571 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.9□□□□□ -0.02
SSR4P51571 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.9□□□□□ -0.02
SSR4P51571 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR4P51571 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 NKILA-202ENST00000614771 2598 ntBASIC14.9□□□□□ -0.02
SSR4P51571 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.9□□□□□ -0.02
SSR4P51571 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SSR4P51571 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR4P51571 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSR4P51571 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSR4P51571 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SSR4P51571 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SSR4P51571 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SSR4P51571 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.89□□□□□ -0.03
SSR4P51571 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 REXO1L8P-201ENST00000604378 1897 ntBASIC14.89□□□□□ -0.03
SSR4P51571 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SSR4P51571 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSR4P51571 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms