Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 METTL21AP1-201ENST00000438852 635 ntBASIC17.66■□□□□ 0.42
PDE6CP51160 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.66■□□□□ 0.42
PDE6CP51160 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.66■□□□□ 0.42
PDE6CP51160 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 AL513210.1-201ENST00000629608 234 ntBASIC17.66■□□□□ 0.42
PDE6CP51160 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.66■□□□□ 0.42
PDE6CP51160 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PDE6CP51160 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PDE6CP51160 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.66■□□□□ 0.42
PDE6CP51160 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PDE6CP51160 AL596087.1-201ENST00000400979 1969 ntBASIC17.66■□□□□ 0.42
PDE6CP51160 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6CP51160 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDE6CP51160 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6CP51160 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PDE6CP51160 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6CP51160 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6CP51160 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 MST1L-201ENST00000442552 2185 ntBASIC17.65■□□□□ 0.42
PDE6CP51160 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.65■□□□□ 0.42
PDE6CP51160 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.65■□□□□ 0.42
PDE6CP51160 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.65■□□□□ 0.42
PDE6CP51160 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.65■□□□□ 0.42
PDE6CP51160 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.65■□□□□ 0.42
PDE6CP51160 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6CP51160 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6CP51160 AL161645.1-201ENST00000622716 1255 ntBASIC17.65■□□□□ 0.42
PDE6CP51160 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6CP51160 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PDE6CP51160 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6CP51160 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6CP51160 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDE6CP51160 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDE6CP51160 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PDE6CP51160 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDE6CP51160 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDE6CP51160 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6CP51160 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6CP51160 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDE6CP51160 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PDE6CP51160 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.64■□□□□ 0.41
PDE6CP51160 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 RN7SL589P-201ENST00000481268 310 ntBASIC17.64■□□□□ 0.41
PDE6CP51160 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6CP51160 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6CP51160 AC105339.1-204ENST00000636249 355 ntBASIC17.64■□□□□ 0.41
PDE6CP51160 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 REXO1L8P-201ENST00000604378 1897 ntBASIC17.64■□□□□ 0.41
PDE6CP51160 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6CP51160 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 AC103702.1-201ENST00000548801 2630 ntBASIC17.64■□□□□ 0.41
PDE6CP51160 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6CP51160 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6CP51160 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6CP51160 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms