Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.06■□□□□ 0.48
CENPFP49454 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.06■□□□□ 0.48
CENPFP49454 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.06■□□□□ 0.48
CENPFP49454 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CENPFP49454 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.06■□□□□ 0.48
CENPFP49454 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.05■□□□□ 0.48
CENPFP49454 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CENPFP49454 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.05■□□□□ 0.48
CENPFP49454 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CENPFP49454 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.05■□□□□ 0.48
CENPFP49454 TARDBPP1-201ENST00000442013 1203 ntBASIC18.05■□□□□ 0.48
CENPFP49454 AL355864.2-201ENST00000447420 863 ntBASIC18.05■□□□□ 0.48
CENPFP49454 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.05■□□□□ 0.48
CENPFP49454 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.05■□□□□ 0.48
CENPFP49454 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.05■□□□□ 0.48
CENPFP49454 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.05■□□□□ 0.48
CENPFP49454 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CENPFP49454 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.05■□□□□ 0.48
CENPFP49454 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
CENPFP49454 HYMAI-201ENST00000635591 3347 ntBASIC18.05■□□□□ 0.48
CENPFP49454 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.05■□□□□ 0.48
CENPFP49454 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.05■□□□□ 0.48
CENPFP49454 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.05■□□□□ 0.48
CENPFP49454 AL662844.4-201ENST00000606367 2838 ntBASIC18.05■□□□□ 0.48
CENPFP49454 MTX1P1-201ENST00000440904 838 ntBASIC18.05■□□□□ 0.48
CENPFP49454 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CENPFP49454 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.05■□□□□ 0.48
CENPFP49454 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.05■□□□□ 0.48
CENPFP49454 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CENPFP49454 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CENPFP49454 KRT8P39-201ENST00000396270 1433 ntBASIC18.05■□□□□ 0.48
CENPFP49454 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.05■□□□□ 0.48
CENPFP49454 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CENPFP49454 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.05■□□□□ 0.48
CENPFP49454 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.04■□□□□ 0.48
CENPFP49454 AC104784.1-201ENST00000473096 294 ntBASIC18.04■□□□□ 0.48
CENPFP49454 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.04■□□□□ 0.48
CENPFP49454 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 GPAA1P2-202ENST00000606848 1787 ntBASIC18.04■□□□□ 0.48
CENPFP49454 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.04■□□□□ 0.48
CENPFP49454 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 AL139384.1-201ENST00000612143 3047 ntBASIC18.04■□□□□ 0.48
CENPFP49454 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CENPFP49454 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.04■□□□□ 0.48
CENPFP49454 RN7SL720P-201ENST00000488178 304 ntBASIC18.04■□□□□ 0.48
CENPFP49454 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.04■□□□□ 0.48
CENPFP49454 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.04■□□□□ 0.48
CENPFP49454 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.04■□□□□ 0.48
CENPFP49454 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 AC138951.2-201ENST00000623455 1161 ntBASIC18.04■□□□□ 0.48
CENPFP49454 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.04■□□□□ 0.48
CENPFP49454 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 AC141586.5-201ENST00000624546 2050 ntBASIC18.04■□□□□ 0.48
CENPFP49454 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.04■□□□□ 0.48
CENPFP49454 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.04■□□□□ 0.48
CENPFP49454 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.04■□□□□ 0.48
CENPFP49454 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
CENPFP49454 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CENPFP49454 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.04■□□□□ 0.48
CENPFP49454 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CENPFP49454 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CENPFP49454 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CENPFP49454 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CENPFP49454 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.03■□□□□ 0.48
CENPFP49454 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CENPFP49454 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.03■□□□□ 0.48
CENPFP49454 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CENPFP49454 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CENPFP49454 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CENPFP49454 AL139010.1-201ENST00000454878 894 ntBASIC18.03■□□□□ 0.48
CENPFP49454 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.03■□□□□ 0.48
CENPFP49454 AC013467.2-201ENST00000605472 835 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms