Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 PMS2P1-201ENST00000431037 1228 ntBASIC14.87□□□□□ -0.03
CENPAP49450 FAM197Y8-203ENST00000450145 560 ntBASIC14.87□□□□□ -0.03
CENPAP49450 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.87□□□□□ -0.03
CENPAP49450 SLC25A6P2-201ENST00000497974 877 ntBASIC14.87□□□□□ -0.03
CENPAP49450 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.87□□□□□ -0.03
CENPAP49450 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 AC005412.3-201ENST00000580309 715 ntBASIC14.87□□□□□ -0.03
CENPAP49450 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CENPAP49450 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 AC132872.4-202ENST00000622924 2756 ntBASIC14.87□□□□□ -0.03
CENPAP49450 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 PAUPAR-201ENST00000630360 2965 ntBASIC14.87□□□□□ -0.03
CENPAP49450 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CENPAP49450 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 AC129492.6-201ENST00000611383 1305 ntBASIC14.87□□□□□ -0.03
CENPAP49450 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CENPAP49450 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CENPAP49450 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 HCG4-201ENST00000418983 998 ntBASIC14.86□□□□□ -0.03
CENPAP49450 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 UNC93B7-201ENST00000509439 705 ntBASIC14.86□□□□□ -0.03
CENPAP49450 AC136632.2-201ENST00000512891 861 ntBASIC14.86□□□□□ -0.03
CENPAP49450 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.86□□□□□ -0.03
CENPAP49450 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.86□□□□□ -0.03
CENPAP49450 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.86□□□□□ -0.03
CENPAP49450 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CENPAP49450 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.86□□□□□ -0.03
CENPAP49450 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 LINC00554-201ENST00000564841 3011 ntBASIC14.85□□□□□ -0.03
CENPAP49450 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CENPAP49450 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.85□□□□□ -0.03
CENPAP49450 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CENPAP49450 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.85□□□□□ -0.03
CENPAP49450 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms