Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.25■□□□□ 0.35
BRCC3P46736 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.25■□□□□ 0.35
BRCC3P46736 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.25■□□□□ 0.35
BRCC3P46736 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 AC025048.6-201ENST00000634326 1161 ntBASIC17.25■□□□□ 0.35
BRCC3P46736 AL109936.8-201ENST00000641772 604 ntBASIC17.25■□□□□ 0.35
BRCC3P46736 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.25■□□□□ 0.35
BRCC3P46736 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BRCC3P46736 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
BRCC3P46736 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRCC3P46736 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BRCC3P46736 ME2P1-201ENST00000426028 1970 ntBASIC17.24■□□□□ 0.35
BRCC3P46736 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BRCC3P46736 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.24■□□□□ 0.35
BRCC3P46736 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.24■□□□□ 0.35
BRCC3P46736 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.24■□□□□ 0.35
BRCC3P46736 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.24■□□□□ 0.35
BRCC3P46736 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.24■□□□□ 0.35
BRCC3P46736 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.24■□□□□ 0.35
BRCC3P46736 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
BRCC3P46736 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRCC3P46736 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.24■□□□□ 0.35
BRCC3P46736 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.24■□□□□ 0.35
BRCC3P46736 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.24■□□□□ 0.35
BRCC3P46736 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BRCC3P46736 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
BRCC3P46736 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
BRCC3P46736 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 SPDYE19P-201ENST00000338590 713 ntBASIC17.23■□□□□ 0.35
BRCC3P46736 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
BRCC3P46736 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.23■□□□□ 0.35
BRCC3P46736 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
BRCC3P46736 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
BRCC3P46736 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.23■□□□□ 0.35
BRCC3P46736 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 HIST3H2BA-201ENST00000436555 524 ntBASIC17.23■□□□□ 0.35
BRCC3P46736 AC114501.2-201ENST00000439631 535 ntBASIC17.23■□□□□ 0.35
BRCC3P46736 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.23■□□□□ 0.35
BRCC3P46736 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.23■□□□□ 0.35
BRCC3P46736 API5-211ENST00000534695 560 ntTSL 5 BASIC17.23■□□□□ 0.35
BRCC3P46736 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.23■□□□□ 0.35
BRCC3P46736 MIR6069-201ENST00000620069 79 ntBASIC17.23■□□□□ 0.35
BRCC3P46736 AC004461.2-201ENST00000629517 803 ntBASIC17.23■□□□□ 0.35
BRCC3P46736 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCC3P46736 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCC3P46736 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.23■□□□□ 0.35
BRCC3P46736 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms