Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX2-1P43699 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 KRT8P26-201ENST00000534154 1276 ntBASIC13.41□□□□□ -0.26
NKX2-1P43699 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.41□□□□□ -0.26
NKX2-1P43699 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 AC011498.5-201ENST00000592027 486 ntBASIC13.41□□□□□ -0.26
NKX2-1P43699 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX2-1P43699 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NKX2-1P43699 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX2-1P43699 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 TMBIM7P-203ENST00000641617 1718 ntBASIC13.41□□□□□ -0.26
NKX2-1P43699 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX2-1P43699 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX2-1P43699 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX2-1P43699 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.41□□□□□ -0.26
NKX2-1P43699 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX2-1P43699 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 AC136621.1-201ENST00000624017 2304 ntBASIC13.4□□□□□ -0.26
NKX2-1P43699 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-1P43699 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-1P43699 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX2-1P43699 AL671277.2-201ENST00000458060 996 ntBASIC13.4□□□□□ -0.26
NKX2-1P43699 AC091607.1-201ENST00000490318 1060 ntBASIC13.4□□□□□ -0.26
NKX2-1P43699 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX2-1P43699 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.4□□□□□ -0.26
NKX2-1P43699 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX2-1P43699 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NKX2-1P43699 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NKX2-1P43699 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX2-1P43699 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
NKX2-1P43699 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX2-1P43699 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX2-1P43699 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.4□□□□□ -0.26
NKX2-1P43699 AC020658.6-201ENST00000623564 1870 ntBASIC13.4□□□□□ -0.26
NKX2-1P43699 AL009178.2-201ENST00000597278 2719 ntBASIC13.4□□□□□ -0.27
NKX2-1P43699 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX2-1P43699 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX2-1P43699 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX2-1P43699 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX2-1P43699 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 AC131009.4-201ENST00000624048 1740 ntBASIC13.39□□□□□ -0.27
NKX2-1P43699 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX2-1P43699 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX2-1P43699 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms