Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SSR1P43307 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.44■□□□□ 0.38
SSR1P43307 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 HYMAI-201ENST00000635591 3347 ntBASIC17.44■□□□□ 0.38
SSR1P43307 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.43■□□□□ 0.38
SSR1P43307 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SSR1P43307 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SSR1P43307 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.43■□□□□ 0.38
SSR1P43307 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.43■□□□□ 0.38
SSR1P43307 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSR1P43307 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.42■□□□□ 0.38
SSR1P43307 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.42■□□□□ 0.38
SSR1P43307 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.42■□□□□ 0.38
SSR1P43307 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.42■□□□□ 0.38
SSR1P43307 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.42■□□□□ 0.38
SSR1P43307 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.42■□□□□ 0.38
SSR1P43307 AC098831.1-202ENST00000438821 336 ntBASIC17.42■□□□□ 0.38
SSR1P43307 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.42■□□□□ 0.38
SSR1P43307 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.42■□□□□ 0.38
SSR1P43307 KRT126P-201ENST00000549467 1181 ntBASIC17.42■□□□□ 0.38
SSR1P43307 AL160237.2-201ENST00000556165 472 ntBASIC17.42■□□□□ 0.38
SSR1P43307 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SSR1P43307 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
SSR1P43307 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.42■□□□□ 0.38
SSR1P43307 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 AC010654.1-201ENST00000615722 808 ntBASIC17.42■□□□□ 0.38
SSR1P43307 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.42■□□□□ 0.38
SSR1P43307 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SSR1P43307 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms