Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT2P35908 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT2P35908 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT2P35908 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KRT2P35908 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.68■□□□□ 0.58
KRT2P35908 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT2P35908 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.68■□□□□ 0.58
KRT2P35908 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT2P35908 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT2P35908 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT2P35908 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT2P35908 UXT-AS1-201ENST00000590504 1525 ntBASIC18.68■□□□□ 0.58
KRT2P35908 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT2P35908 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KRT2P35908 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT2P35908 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT2P35908 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
KRT2P35908 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KRT2P35908 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT2P35908 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KRT2P35908 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KRT2P35908 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT2P35908 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT2P35908 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT2P35908 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT2P35908 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
KRT2P35908 AC245100.5-201ENST00000452108 331 ntBASIC18.67■□□□□ 0.58
KRT2P35908 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT2P35908 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 AL513210.1-201ENST00000629608 234 ntBASIC18.67■□□□□ 0.58
KRT2P35908 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KRT2P35908 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT2P35908 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT2P35908 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT2P35908 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT2P35908 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 CDC14C-201ENST00000428251 1719 ntBASIC18.66■□□□□ 0.58
KRT2P35908 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT2P35908 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT2P35908 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT2P35908 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT2P35908 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT2P35908 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT2P35908 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT2P35908 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT2P35908 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
KRT2P35908 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT2P35908 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT2P35908 AL365203.3-201ENST00000609742 2057 ntBASIC18.65■□□□□ 0.58
KRT2P35908 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT2P35908 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT2P35908 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT2P35908 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT2P35908 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
KRT2P35908 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT2P35908 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT2P35908 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT2P35908 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT2P35908 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT2P35908 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT2P35908 HAUS4P1-201ENST00000406739 1145 ntBASIC18.65■□□□□ 0.58
KRT2P35908 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms