Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SFTPDP35247 AC093724.1-201ENST00000448659 1027 ntBASIC14.79□□□□□ -0.04
SFTPDP35247 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPDP35247 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SFTPDP35247 POU5F1P6-201ENST00000466990 990 ntBASIC14.79□□□□□ -0.04
SFTPDP35247 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.79□□□□□ -0.04
SFTPDP35247 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.79□□□□□ -0.04
SFTPDP35247 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPDP35247 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.79□□□□□ -0.04
SFTPDP35247 PCDHB19P-201ENST00000570871 2371 ntBASIC14.79□□□□□ -0.04
SFTPDP35247 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.79□□□□□ -0.04
SFTPDP35247 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPDP35247 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.79□□□□□ -0.04
SFTPDP35247 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.79□□□□□ -0.04
SFTPDP35247 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.79□□□□□ -0.04
SFTPDP35247 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.79□□□□□ -0.04
SFTPDP35247 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SFTPDP35247 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SFTPDP35247 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SFTPDP35247 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFTPDP35247 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFTPDP35247 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SFTPDP35247 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SFTPDP35247 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.78□□□□□ -0.04
SFTPDP35247 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.78□□□□□ -0.04
SFTPDP35247 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.78□□□□□ -0.04
SFTPDP35247 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.78□□□□□ -0.04
SFTPDP35247 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.78□□□□□ -0.04
SFTPDP35247 SLC25A39P2-201ENST00000537614 270 ntBASIC14.78□□□□□ -0.04
SFTPDP35247 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.78□□□□□ -0.04
SFTPDP35247 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.78□□□□□ -0.04
SFTPDP35247 KRT8P23-201ENST00000560090 1207 ntBASIC14.78□□□□□ -0.04
SFTPDP35247 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 AP000842.3-202ENST00000569238 1080 ntBASIC14.78□□□□□ -0.04
SFTPDP35247 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.78□□□□□ -0.04
SFTPDP35247 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
SFTPDP35247 AP001160.2-201ENST00000596071 487 ntBASIC14.78□□□□□ -0.04
SFTPDP35247 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.78□□□□□ -0.04
SFTPDP35247 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.78□□□□□ -0.04
SFTPDP35247 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SFTPDP35247 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
SFTPDP35247 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SFTPDP35247 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFTPDP35247 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.77□□□□□ -0.04
SFTPDP35247 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SFTPDP35247 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.77□□□□□ -0.04
SFTPDP35247 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.77□□□□□ -0.04
SFTPDP35247 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.77□□□□□ -0.04
SFTPDP35247 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SFTPDP35247 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SFTPDP35247 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms