Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTNNA1P35221 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.27■□□□□ 0.36
CTNNA1P35221 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CTNNA1P35221 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTNNA1P35221 AC108073.2-201ENST00000464002 357 ntBASIC17.27■□□□□ 0.36
CTNNA1P35221 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.27■□□□□ 0.36
CTNNA1P35221 AC005593.1-201ENST00000624894 515 ntBASIC17.27■□□□□ 0.36
CTNNA1P35221 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
CTNNA1P35221 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CTNNA1P35221 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 AP005117.1-202ENST00000581724 1908 ntBASIC17.27■□□□□ 0.35
CTNNA1P35221 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 AC069224.1-201ENST00000566372 1715 ntBASIC17.27■□□□□ 0.35
CTNNA1P35221 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNNA1P35221 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
CTNNA1P35221 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.26■□□□□ 0.35
CTNNA1P35221 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.26■□□□□ 0.35
CTNNA1P35221 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTNNA1P35221 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNNA1P35221 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNNA1P35221 MIR648-201ENST00000385046 94 ntBASIC17.26■□□□□ 0.35
CTNNA1P35221 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.26■□□□□ 0.35
CTNNA1P35221 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.26■□□□□ 0.35
CTNNA1P35221 FAM185BP-201ENST00000443595 716 ntBASIC17.26■□□□□ 0.35
CTNNA1P35221 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTNNA1P35221 MIR4515-201ENST00000584082 81 ntBASIC17.26■□□□□ 0.35
CTNNA1P35221 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNNA1P35221 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTNNA1P35221 AC004790.2-201ENST00000623588 572 ntBASIC17.26■□□□□ 0.35
CTNNA1P35221 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.26■□□□□ 0.35
CTNNA1P35221 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTNNA1P35221 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNNA1P35221 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNNA1P35221 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 AC005622.1-201ENST00000636801 1703 ntBASIC17.26■□□□□ 0.35
CTNNA1P35221 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTNNA1P35221 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNNA1P35221 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CTNNA1P35221 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.26■□□□□ 0.35
CTNNA1P35221 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 RNU1-129P-201ENST00000384064 167 ntBASIC17.25■□□□□ 0.35
CTNNA1P35221 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 FAM197Y8-203ENST00000450145 560 ntBASIC17.25■□□□□ 0.35
CTNNA1P35221 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CTNNA1P35221 U1.21-201ENST00000580816 167 ntBASIC17.25■□□□□ 0.35
CTNNA1P35221 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms