Protein–RNA interactions for Protein: P32302

CXCR5, C-X-C chemokine receptor type 5, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5P32302 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CXCR5P32302 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR5P32302 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.27■□□□□ 0.35
CXCR5P32302 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CXCR5P32302 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
CXCR5P32302 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.27■□□□□ 0.35
CXCR5P32302 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR5P32302 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR5P32302 AC023157.3-201ENST00000619086 2088 ntBASIC17.27■□□□□ 0.35
CXCR5P32302 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CXCR5P32302 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.26■□□□□ 0.35
CXCR5P32302 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.26■□□□□ 0.35
CXCR5P32302 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CXCR5P32302 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.26■□□□□ 0.35
CXCR5P32302 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.26■□□□□ 0.35
CXCR5P32302 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 PGM5P2-202ENST00000637225 1043 ntBASIC17.26■□□□□ 0.35
CXCR5P32302 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.26■□□□□ 0.35
CXCR5P32302 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CXCR5P32302 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CXCR5P32302 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 AC092919.2-201ENST00000623631 1645 ntBASIC17.25■□□□□ 0.35
CXCR5P32302 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CXCR5P32302 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCR5P32302 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCR5P32302 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCR5P32302 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CXCR5P32302 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.25■□□□□ 0.35
CXCR5P32302 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCR5P32302 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.25■□□□□ 0.35
CXCR5P32302 AC005412.3-201ENST00000580309 715 ntBASIC17.25■□□□□ 0.35
CXCR5P32302 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.25■□□□□ 0.35
CXCR5P32302 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.25■□□□□ 0.35
CXCR5P32302 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CXCR5P32302 AC093458.2-201ENST00000623150 629 ntBASIC17.25■□□□□ 0.35
CXCR5P32302 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CXCR5P32302 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CXCR5P32302 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR5P32302 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CXCR5P32302 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CXCR5P32302 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.24■□□□□ 0.35
CXCR5P32302 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms