Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC8P31273 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HOXC8P31273 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC8P31273 REXO1L1P-202ENST00000608646 1974 ntBASIC17.53■□□□□ 0.4
HOXC8P31273 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
HOXC8P31273 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 ALOX12P2-203ENST00000570921 1945 ntBASIC17.53■□□□□ 0.4
HOXC8P31273 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXC8P31273 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HOXC8P31273 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXC8P31273 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 HAUS4P1-201ENST00000406739 1145 ntBASIC17.53■□□□□ 0.4
HOXC8P31273 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HOXC8P31273 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC8P31273 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.53■□□□□ 0.4
HOXC8P31273 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC8P31273 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.53■□□□□ 0.4
HOXC8P31273 AC133539.2-201ENST00000604757 467 ntBASIC17.53■□□□□ 0.4
HOXC8P31273 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC8P31273 AL033527.4-201ENST00000641026 673 ntBASIC17.53■□□□□ 0.4
HOXC8P31273 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC8P31273 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC8P31273 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC8P31273 AC134407.2-201ENST00000625089 1978 ntBASIC17.53■□□□□ 0.4
HOXC8P31273 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC8P31273 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC8P31273 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HOXC8P31273 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC8P31273 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HOXC8P31273 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC8P31273 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC8P31273 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXC8P31273 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC8P31273 KRT223P-202ENST00000449164 1292 ntBASIC17.52■□□□□ 0.4
HOXC8P31273 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HOXC8P31273 SLC25A47P1-201ENST00000531577 414 ntBASIC17.52■□□□□ 0.4
HOXC8P31273 ENPP7P5-201ENST00000541031 1031 ntBASIC17.52■□□□□ 0.4
HOXC8P31273 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
HOXC8P31273 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXC8P31273 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXC8P31273 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXC8P31273 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXC8P31273 AC000095.1-201ENST00000603208 874 ntBASIC17.52■□□□□ 0.4
HOXC8P31273 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
HOXC8P31273 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 CU634019.7-201ENST00000624153 1185 ntBASIC17.52■□□□□ 0.4
HOXC8P31273 FP236241.2-201ENST00000624906 1185 ntBASIC17.52■□□□□ 0.4
HOXC8P31273 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HOXC8P31273 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC8P31273 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC8P31273 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HOXC8P31273 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXC8P31273 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC8P31273 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC8P31273 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC8P31273 AC018665.1-201ENST00000622927 1362 ntBASIC17.52■□□□□ 0.39
HOXC8P31273 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXC8P31273 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC8P31273 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HOXC8P31273 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC8P31273 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms