Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 TOP3BP1-201ENST00000420768 1380 ntBASIC15.3■□□□□ 0.04
CHMP24386 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.3■□□□□ 0.04
CHMP24386 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.3■□□□□ 0.04
CHMP24386 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.3■□□□□ 0.04
CHMP24386 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.3■□□□□ 0.04
CHMP24386 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 KRT19P2-202ENST00000557173 1012 ntBASIC15.3■□□□□ 0.04
CHMP24386 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.3■□□□□ 0.04
CHMP24386 PDPK2P-202ENST00000562415 1191 ntBASIC15.3■□□□□ 0.04
CHMP24386 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.3■□□□□ 0.04
CHMP24386 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.3■□□□□ 0.04
CHMP24386 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.3■□□□□ 0.04
CHMP24386 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.3■□□□□ 0.04
CHMP24386 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.3■□□□□ 0.04
CHMP24386 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHMP24386 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 AC006449.6-201ENST00000612330 2296 ntBASIC15.29■□□□□ 0.04
CHMP24386 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHMP24386 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 GPX1P2-201ENST00000429271 606 ntBASIC15.29■□□□□ 0.04
CHMP24386 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.29■□□□□ 0.04
CHMP24386 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.29■□□□□ 0.04
CHMP24386 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.29■□□□□ 0.04
CHMP24386 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.29■□□□□ 0.04
CHMP24386 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 AC079781.4-201ENST00000641908 219 ntBASIC15.29■□□□□ 0.04
CHMP24386 AL645728.2-201ENST00000641974 660 ntBASIC15.29■□□□□ 0.04
CHMP24386 AC092865.6-201ENST00000642101 219 ntBASIC15.29■□□□□ 0.04
CHMP24386 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.29■□□□□ 0.04
CHMP24386 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHMP24386 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHMP24386 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 SNX33P1-201ENST00000592116 1762 ntBASIC15.29■□□□□ 0.04
CHMP24386 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.29■□□□□ 0.04
CHMP24386 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHMP24386 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.28■□□□□ 0.04
CHMP24386 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 AC025580.3-201ENST00000617932 1424 ntBASIC15.28■□□□□ 0.04
CHMP24386 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHMP24386 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHMP24386 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CHMP24386 RPSAP43-201ENST00000402237 625 ntBASIC15.28■□□□□ 0.04
CHMP24386 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.28■□□□□ 0.04
CHMP24386 AC074386.1-202ENST00000463561 864 ntBASIC15.28■□□□□ 0.04
CHMP24386 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms