Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.24■□□□□ 0.03
NR4A1P22736 RBM17P3-201ENST00000417687 1192 ntBASIC15.24■□□□□ 0.03
NR4A1P22736 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 AC106795.1-205ENST00000512851 1056 ntBASIC15.24■□□□□ 0.03
NR4A1P22736 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.24■□□□□ 0.03
NR4A1P22736 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.24■□□□□ 0.03
NR4A1P22736 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
NR4A1P22736 AL121894.2-201ENST00000602977 491 ntBASIC15.24■□□□□ 0.03
NR4A1P22736 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.24■□□□□ 0.03
NR4A1P22736 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.24■□□□□ 0.03
NR4A1P22736 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NR4A1P22736 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.24■□□□□ 0.03
NR4A1P22736 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NR4A1P22736 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.24■□□□□ 0.03
NR4A1P22736 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR4A1P22736 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.24■□□□□ 0.03
NR4A1P22736 AC106881.1-201ENST00000605849 3329 ntBASIC15.23■□□□□ 0.03
NR4A1P22736 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.23■□□□□ 0.03
NR4A1P22736 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.23■□□□□ 0.03
NR4A1P22736 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 AF238378.1-201ENST00000526806 358 ntBASIC15.23■□□□□ 0.03
NR4A1P22736 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.23■□□□□ 0.03
NR4A1P22736 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.23■□□□□ 0.03
NR4A1P22736 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NR4A1P22736 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NR4A1P22736 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR4A1P22736 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NR4A1P22736 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR4A1P22736 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.22■□□□□ 0.03
NR4A1P22736 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms