Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFX1P22670 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX1P22670 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.76■□□□□ 0.43
RFX1P22670 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 AL365203.3-201ENST00000609742 2057 ntBASIC17.75■□□□□ 0.43
RFX1P22670 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX1P22670 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 MIR648-201ENST00000385046 94 ntBASIC17.75■□□□□ 0.43
RFX1P22670 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 AC015922.1-201ENST00000421102 1152 ntBASIC17.75■□□□□ 0.43
RFX1P22670 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.75■□□□□ 0.43
RFX1P22670 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX1P22670 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RFX1P22670 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.75■□□□□ 0.43
RFX1P22670 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RFX1P22670 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.75■□□□□ 0.43
RFX1P22670 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.75■□□□□ 0.43
RFX1P22670 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX1P22670 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 AC012645.4-201ENST00000610691 1061 ntBASIC17.75■□□□□ 0.43
RFX1P22670 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX1P22670 Z92544.3-201ENST00000624747 417 ntBASIC17.75■□□□□ 0.43
RFX1P22670 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX1P22670 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX1P22670 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
RFX1P22670 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX1P22670 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX1P22670 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RFX1P22670 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFX1P22670 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RFX1P22670 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFX1P22670 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.74■□□□□ 0.43
RFX1P22670 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.74■□□□□ 0.43
RFX1P22670 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 DUX4L27-201ENST00000554796 1261 ntBASIC17.74■□□□□ 0.43
RFX1P22670 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 AL009183.1-201ENST00000603760 355 ntBASIC17.74■□□□□ 0.43
RFX1P22670 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
RFX1P22670 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.74■□□□□ 0.43
RFX1P22670 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RFX1P22670 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.74■□□□□ 0.43
RFX1P22670 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.74■□□□□ 0.43
RFX1P22670 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.74■□□□□ 0.43
RFX1P22670 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX1P22670 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.74■□□□□ 0.43
RFX1P22670 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX1P22670 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX1P22670 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX1P22670 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms