Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL1P22362 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL1P22362 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCL1P22362 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14□□□□□ -0.17
CCL1P22362 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14□□□□□ -0.17
CCL1P22362 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCL1P22362 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCL1P22362 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCL1P22362 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCL1P22362 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CCL1P22362 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 KRT18P2-201ENST00000447938 1258 ntBASIC14□□□□□ -0.17
CCL1P22362 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14□□□□□ -0.17
CCL1P22362 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14□□□□□ -0.17
CCL1P22362 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCL1P22362 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14□□□□□ -0.17
CCL1P22362 PDPK2P-202ENST00000562415 1191 ntBASIC14□□□□□ -0.17
CCL1P22362 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14□□□□□ -0.17
CCL1P22362 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14□□□□□ -0.17
CCL1P22362 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14□□□□□ -0.17
CCL1P22362 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCL1P22362 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CCL1P22362 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCL1P22362 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
CCL1P22362 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14□□□□□ -0.17
CCL1P22362 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL1P22362 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCL1P22362 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14□□□□□ -0.17
CCL1P22362 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.99□□□□□ -0.17
CCL1P22362 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL1P22362 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL1P22362 AC002056.1-201ENST00000395613 760 ntBASIC13.99□□□□□ -0.17
CCL1P22362 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.99□□□□□ -0.17
CCL1P22362 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCL1P22362 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.99□□□□□ -0.17
CCL1P22362 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL1P22362 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL1P22362 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms