Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB3BP20337 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 AC005521.1-201ENST00000393351 872 ntBASIC14.34□□□□□ -0.11
RAB3BP20337 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB3BP20337 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB3BP20337 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB3BP20337 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB3BP20337 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RAB3BP20337 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB3BP20337 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 NCF1C-201ENST00000438382 1427 ntBASIC14.33□□□□□ -0.11
RAB3BP20337 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.33□□□□□ -0.11
RAB3BP20337 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB3BP20337 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB3BP20337 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB3BP20337 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RAB3BP20337 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB3BP20337 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB3BP20337 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 BX276092.5-203ENST00000456199 560 ntBASIC14.33□□□□□ -0.12
RAB3BP20337 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB3BP20337 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB3BP20337 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB3BP20337 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB3BP20337 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
RAB3BP20337 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB3BP20337 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB3BP20337 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
RAB3BP20337 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB3BP20337 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms