Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ATF1P18846 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ATF1P18846 NORAD-201ENST00000565493 5339 ntBASIC14.36□□□□□ -0.11
ATF1P18846 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.36□□□□□ -0.11
ATF1P18846 MIR648-201ENST00000385046 94 ntBASIC14.36□□□□□ -0.11
ATF1P18846 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.36□□□□□ -0.11
ATF1P18846 SAPCD2P3-201ENST00000455031 850 ntBASIC14.36□□□□□ -0.11
ATF1P18846 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.36□□□□□ -0.11
ATF1P18846 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 CYP2A7P1-201ENST00000595391 815 ntBASIC14.36□□□□□ -0.11
ATF1P18846 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ATF1P18846 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 AP003680.1-201ENST00000598970 3660 ntBASIC14.36□□□□□ -0.11
ATF1P18846 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.36□□□□□ -0.11
ATF1P18846 AL353732.1-201ENST00000569618 1459 ntBASIC14.36□□□□□ -0.11
ATF1P18846 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ATF1P18846 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATF1P18846 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
ATF1P18846 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.36□□□□□ -0.11
ATF1P18846 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.36□□□□□ -0.11
ATF1P18846 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.35□□□□□ -0.11
ATF1P18846 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 AKR1C7P-201ENST00000305623 895 ntBASIC14.35□□□□□ -0.11
ATF1P18846 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.35□□□□□ -0.11
ATF1P18846 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.35□□□□□ -0.11
ATF1P18846 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.35□□□□□ -0.11
ATF1P18846 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.35□□□□□ -0.11
ATF1P18846 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.35□□□□□ -0.11
ATF1P18846 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.35□□□□□ -0.11
ATF1P18846 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.35□□□□□ -0.11
ATF1P18846 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.35□□□□□ -0.11
ATF1P18846 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.35□□□□□ -0.11
ATF1P18846 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.35□□□□□ -0.11
ATF1P18846 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 GGTLC5P-201ENST00000617623 998 ntBASIC14.35□□□□□ -0.11
ATF1P18846 AP001350.2-201ENST00000625104 1094 ntBASIC14.35□□□□□ -0.11
ATF1P18846 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ATF1P18846 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ATF1P18846 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.35□□□□□ -0.11
ATF1P18846 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.35□□□□□ -0.11
ATF1P18846 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATF1P18846 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.35□□□□□ -0.11
ATF1P18846 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
ATF1P18846 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATF1P18846 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATF1P18846 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATF1P18846 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ATF1P18846 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.34□□□□□ -0.11
ATF1P18846 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.34□□□□□ -0.11
ATF1P18846 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATF1P18846 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.34□□□□□ -0.11
ATF1P18846 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATF1P18846 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ATF1P18846 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATF1P18846 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.34□□□□□ -0.11
ATF1P18846 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms