Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.77■□□□□ 0.28
ERCC2P18074 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.77■□□□□ 0.28
ERCC2P18074 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ERCC2P18074 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.77■□□□□ 0.28
ERCC2P18074 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.77■□□□□ 0.28
ERCC2P18074 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
ERCC2P18074 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.77■□□□□ 0.28
ERCC2P18074 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.77■□□□□ 0.28
ERCC2P18074 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.77■□□□□ 0.28
ERCC2P18074 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.77■□□□□ 0.28
ERCC2P18074 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
ERCC2P18074 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.77■□□□□ 0.28
ERCC2P18074 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.77■□□□□ 0.28
ERCC2P18074 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 SLC25A39P2-201ENST00000537614 270 ntBASIC16.77■□□□□ 0.28
ERCC2P18074 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.77■□□□□ 0.28
ERCC2P18074 MIR4321-201ENST00000592276 80 ntBASIC16.77■□□□□ 0.28
ERCC2P18074 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 AC055717.3-201ENST00000622967 595 ntBASIC16.77■□□□□ 0.28
ERCC2P18074 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ERCC2P18074 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ERCC2P18074 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ERCC2P18074 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
ERCC2P18074 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ERCC2P18074 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ERCC2P18074 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ERCC2P18074 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ERCC2P18074 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ERCC2P18074 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ERCC2P18074 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.77■□□□□ 0.27
ERCC2P18074 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.77■□□□□ 0.27
ERCC2P18074 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ERCC2P18074 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
ERCC2P18074 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 AL603832.2-201ENST00000566195 2125 ntBASIC16.76■□□□□ 0.27
ERCC2P18074 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.76■□□□□ 0.27
ERCC2P18074 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ERCC2P18074 MIR648-201ENST00000385046 94 ntBASIC16.76■□□□□ 0.27
ERCC2P18074 AC005237.2-201ENST00000434368 219 ntBASIC16.76■□□□□ 0.27
ERCC2P18074 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 AP000344.2-201ENST00000512987 629 ntBASIC16.76■□□□□ 0.27
ERCC2P18074 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.76■□□□□ 0.27
ERCC2P18074 AC093520.2-201ENST00000561830 333 ntBASIC16.76■□□□□ 0.27
ERCC2P18074 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 AC023511.2-201ENST00000618803 211 ntBASIC16.76■□□□□ 0.27
ERCC2P18074 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.76■□□□□ 0.27
ERCC2P18074 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ERCC2P18074 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.76■□□□□ 0.27
ERCC2P18074 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ERCC2P18074 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
ERCC2P18074 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ERCC2P18074 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ERCC2P18074 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ERCC2P18074 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.75■□□□□ 0.27
ERCC2P18074 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ERCC2P18074 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.75■□□□□ 0.27
ERCC2P18074 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
ERCC2P18074 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.75■□□□□ 0.27
ERCC2P18074 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.75■□□□□ 0.27
ERCC2P18074 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 AC134684.3-201ENST00000641758 218 ntBASIC16.75■□□□□ 0.27
ERCC2P18074 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ERCC2P18074 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.75■□□□□ 0.27
ERCC2P18074 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms