Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL11A1P12107 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.21■□□□□ 0.51
COL11A1P12107 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL11A1P12107 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL11A1P12107 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 AL121723.1-201ENST00000445194 1519 ntBASIC18.21■□□□□ 0.51
COL11A1P12107 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
COL11A1P12107 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL11A1P12107 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.21■□□□□ 0.51
COL11A1P12107 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.21■□□□□ 0.51
COL11A1P12107 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.21■□□□□ 0.51
COL11A1P12107 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.21■□□□□ 0.51
COL11A1P12107 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.21■□□□□ 0.51
COL11A1P12107 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL11A1P12107 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL11A1P12107 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.21■□□□□ 0.5
COL11A1P12107 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.2■□□□□ 0.5
COL11A1P12107 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
COL11A1P12107 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.2■□□□□ 0.5
COL11A1P12107 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
COL11A1P12107 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.2■□□□□ 0.5
COL11A1P12107 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.2■□□□□ 0.5
COL11A1P12107 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.2■□□□□ 0.5
COL11A1P12107 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COL11A1P12107 AC097359.3-201ENST00000603982 1210 ntBASIC18.2■□□□□ 0.5
COL11A1P12107 AC244669.2-201ENST00000612320 853 ntBASIC18.2■□□□□ 0.5
COL11A1P12107 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.2■□□□□ 0.5
COL11A1P12107 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL11A1P12107 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL11A1P12107 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.2■□□□□ 0.5
COL11A1P12107 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
COL11A1P12107 MTHFR-217ENST00000641820 1569 ntBASIC18.19■□□□□ 0.5
COL11A1P12107 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.19■□□□□ 0.5
COL11A1P12107 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.19■□□□□ 0.5
COL11A1P12107 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.19■□□□□ 0.5
COL11A1P12107 AC133539.2-201ENST00000604757 467 ntBASIC18.19■□□□□ 0.5
COL11A1P12107 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.19■□□□□ 0.5
COL11A1P12107 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
COL11A1P12107 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
COL11A1P12107 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 AC005229.1-201ENST00000392885 409 ntBASIC18.19■□□□□ 0.5
COL11A1P12107 HAUS4P1-201ENST00000406739 1145 ntBASIC18.19■□□□□ 0.5
COL11A1P12107 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.19■□□□□ 0.5
COL11A1P12107 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.19■□□□□ 0.5
COL11A1P12107 AC233724.13-201ENST00000598383 410 ntBASIC18.19■□□□□ 0.5
COL11A1P12107 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.19■□□□□ 0.5
COL11A1P12107 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL11A1P12107 REXO1L1P-202ENST00000608646 1974 ntBASIC18.18■□□□□ 0.5
COL11A1P12107 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.18■□□□□ 0.5
COL11A1P12107 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL11A1P12107 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms