Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC003101.2-201ENST00000612557 442 ntBASIC19.14■□□□□ 0.65
TOP1P11387 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.14■□□□□ 0.65
TOP1P11387 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TOP1P11387 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP1P11387 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.14■□□□□ 0.65
TOP1P11387 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOP1P11387 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.14■□□□□ 0.65
TOP1P11387 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TOP1P11387 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 AC092171.3-201ENST00000610122 2651 ntBASIC19.13■□□□□ 0.65
TOP1P11387 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.13■□□□□ 0.65
TOP1P11387 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP1P11387 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.13■□□□□ 0.65
TOP1P11387 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.13■□□□□ 0.65
TOP1P11387 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP1P11387 AC140878.1-201ENST00000565277 250 ntBASIC19.13■□□□□ 0.65
TOP1P11387 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP1P11387 AC007967.4-201ENST00000614700 386 ntBASIC19.13■□□□□ 0.65
TOP1P11387 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.13■□□□□ 0.65
TOP1P11387 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TOP1P11387 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
TOP1P11387 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TOP1P11387 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP1P11387 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TOP1P11387 AC008741.2-201ENST00000612792 3115 ntBASIC19.13■□□□□ 0.65
TOP1P11387 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TOP1P11387 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.12■□□□□ 0.65
TOP1P11387 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.12■□□□□ 0.65
TOP1P11387 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.12■□□□□ 0.65
TOP1P11387 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.12■□□□□ 0.65
TOP1P11387 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TOP1P11387 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TOP1P11387 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 MIR770-201ENST00000390219 98 ntBASIC19.12■□□□□ 0.65
TOP1P11387 POU5F1P6-201ENST00000466990 990 ntBASIC19.12■□□□□ 0.65
TOP1P11387 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.12■□□□□ 0.65
TOP1P11387 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.12■□□□□ 0.65
TOP1P11387 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.12■□□□□ 0.65
TOP1P11387 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.12■□□□□ 0.65
TOP1P11387 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TOP1P11387 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP1P11387 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP1P11387 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TOP1P11387 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.11■□□□□ 0.65
TOP1P11387 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TOP1P11387 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP1P11387 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TOP1P11387 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TOP1P11387 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP1P11387 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP1P11387 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 AC024267.1-201ENST00000582320 895 ntBASIC19.11■□□□□ 0.65
TOP1P11387 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.11■□□□□ 0.65
TOP1P11387 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.11■□□□□ 0.65
TOP1P11387 AC005498.2-205ENST00000593218 784 ntBASIC19.11■□□□□ 0.65
TOP1P11387 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TOP1P11387 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP1P11387 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TOP1P11387 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP1P11387 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms