Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AL513480.1-201ENST00000451731 511 ntBASIC16.42■□□□□ 0.22
THRAP10827 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
THRAP10827 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.42■□□□□ 0.22
THRAP10827 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
THRAP10827 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
THRAP10827 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
THRAP10827 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.42■□□□□ 0.22
THRAP10827 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
THRAP10827 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.42■□□□□ 0.22
THRAP10827 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.42■□□□□ 0.22
THRAP10827 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
THRAP10827 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
THRAP10827 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
THRAP10827 AC129492.6-201ENST00000611383 1305 ntBASIC16.42■□□□□ 0.22
THRAP10827 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.42■□□□□ 0.22
THRAP10827 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THRAP10827 AC063926.3-201ENST00000624734 5658 ntBASIC16.41■□□□□ 0.22
THRAP10827 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
THRAP10827 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.41■□□□□ 0.22
THRAP10827 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
THRAP10827 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.41■□□□□ 0.22
THRAP10827 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.41■□□□□ 0.22
THRAP10827 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.41■□□□□ 0.22
THRAP10827 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.41■□□□□ 0.22
THRAP10827 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.41■□□□□ 0.22
THRAP10827 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
THRAP10827 AC104640.1-201ENST00000562617 2109 ntBASIC16.41■□□□□ 0.22
THRAP10827 AP002472.1-201ENST00000577490 586 ntBASIC16.41■□□□□ 0.22
THRAP10827 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 AC027612.4-201ENST00000605371 583 ntBASIC16.41■□□□□ 0.22
THRAP10827 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.41■□□□□ 0.22
THRAP10827 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
THRAP10827 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.41■□□□□ 0.22
THRAP10827 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
THRAP10827 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
THRAP10827 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.41■□□□□ 0.22
THRAP10827 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
THRAP10827 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.41■□□□□ 0.22
THRAP10827 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.4■□□□□ 0.22
THRAP10827 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.4■□□□□ 0.22
THRAP10827 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.4■□□□□ 0.22
THRAP10827 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.4■□□□□ 0.22
THRAP10827 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
THRAP10827 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.4■□□□□ 0.22
THRAP10827 RFPL4AP1-201ENST00000530883 850 ntBASIC16.4■□□□□ 0.22
THRAP10827 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.4■□□□□ 0.22
THRAP10827 REXO1L3P-201ENST00000622202 1288 ntBASIC16.4■□□□□ 0.22
THRAP10827 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.4■□□□□ 0.22
THRAP10827 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.4■□□□□ 0.22
THRAP10827 AC092919.2-201ENST00000623631 1645 ntBASIC16.4■□□□□ 0.22
THRAP10827 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
THRAP10827 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
THRAP10827 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms