Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 AC021097.1-201ENST00000607902 574 ntBASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 AC064836.3-201ENST00000607928 673 ntBASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 PRAL-201ENST00000624952 3286 ntBASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 BCAR1-209ENST00000546196 1340 ntBASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.6□□□□□ -0.23
IGHV3-43DP0DP04 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 RPL13AP23-201ENST00000480739 586 ntBASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 AC096734.2-201ENST00000562054 433 ntBASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 AC034105.1-201ENST00000563488 319 ntBASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 AC023141.13-201ENST00000604991 943 ntBASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 AC007064.4-201ENST00000637740 555 ntBASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms