Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 LINC01023-201ENST00000606054 436 ntBASIC13.74□□□□□ -0.21
CD74P04233 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD74P04233 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.74□□□□□ -0.21
CD74P04233 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.74□□□□□ -0.21
CD74P04233 AC097493.4-201ENST00000641197 219 ntBASIC13.74□□□□□ -0.21
CD74P04233 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 CICP23-201ENST00000605013 2741 ntBASIC13.74□□□□□ -0.21
CD74P04233 AC011477.6-201ENST00000604980 1927 ntBASIC13.74□□□□□ -0.21
CD74P04233 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD74P04233 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 AC005089.1-201ENST00000619486 2241 ntBASIC13.74□□□□□ -0.21
CD74P04233 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD74P04233 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.74□□□□□ -0.21
CD74P04233 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD74P04233 AC026748.1-201ENST00000624349 3251 ntBASIC13.74□□□□□ -0.21
CD74P04233 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CD74P04233 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 AP003680.1-201ENST00000598970 3660 ntBASIC13.73□□□□□ -0.21
CD74P04233 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
CD74P04233 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.73□□□□□ -0.21
CD74P04233 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.73□□□□□ -0.21
CD74P04233 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 HAUS4P1-201ENST00000406739 1145 ntBASIC13.73□□□□□ -0.21
CD74P04233 AC211429.1-201ENST00000415277 523 ntBASIC13.73□□□□□ -0.21
CD74P04233 HCG4-201ENST00000418983 998 ntBASIC13.73□□□□□ -0.21
CD74P04233 DRAXINP1-201ENST00000437611 948 ntBASIC13.73□□□□□ -0.21
CD74P04233 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.73□□□□□ -0.21
CD74P04233 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.73□□□□□ -0.21
CD74P04233 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CD74P04233 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD74P04233 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD74P04233 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.73□□□□□ -0.21
CD74P04233 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.73□□□□□ -0.21
CD74P04233 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.73□□□□□ -0.21
CD74P04233 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD74P04233 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 AC016734.2-201ENST00000624325 1377 ntBASIC13.72□□□□□ -0.21
CD74P04233 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD74P04233 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.72□□□□□ -0.21
CD74P04233 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD74P04233 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms